This week I acquired a linux iso file that I will run using Virtual Box, so I will have something to put Singularity on, and reviewed how to use Singularity and DOCK.
Things I have to do for the project to be finished:
[X] – Not done
This past week I set up a git repo for my senior research, and am now working to create a system diagram for my project.
In addition, this week I will be working through the source code of scikit-learn to better understand how they create their decision trees, and identify which parts of the extensive source code are required for my project, so as to reduce the space required for the research.
So this week I went to get DOCK, found out that I need a license to use it, and that licenses are free for academic purposes. I’ve got a DOCK license and I’m working on learning the ins and outs of it, but I’ve got a pretty good handle on it already.
Things I have to do for the project to be finished:
[X] – Not done [O] – Done [I] – In progress[O] Get a DOCK license [I] Familiarize myself with DOCK [I] Get a linux VM set up that can run Singularity [X] Install Singularity [X] Create Singularity Virtual Machine [X] Write Paper
I realize my ideas are a bit general at the moment, but I am trying to make them more specific and novel after discussing with Dave and Ajit.